FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007927779

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927779
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences501684
Sequences flagged as poor quality0
Sequence length44
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCCTGACCACGCGGACCGGTGGAAGGACCTTCGCCCGGATCAT8290.16524346002663032No Hit
CGGACCTTCGCCCGGGTCATCTGCCGGGCCCTGTTCGATGGCAC7340.14630723722502612No Hit
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT7190.14331730730898334No Hit
GGAATGACGCAGGATCGCGCAGCCTACGGTGTCGGTGCGATCCT6030.12019518262491927No Hit
AGAACTGAGCCTTCACTGGTTCAGCTCCCTCGGTCGAGTACGCT5900.11760391003101554No Hit
GGTGGATGGGCCTTCACCAGGATCGTCAGCCGGGCCCTGCTCGA5400.10763747697753964No Hit
GGCGCCCGCGGTTCAACCAATGGTAACACAAGAACTGAGCCTTC5020.10006298785689798No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)