FastQCFastQC Report
Wed 31 May 2023
EGAF00007927800

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927800
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences495007
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT14410.2911069944465432No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG12650.2555519416897135No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATC8750.1767651770581022No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8700.1757550903320559No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC8700.1757550903320559No Hit
GGTTACCAGGAACCGCCGGCACCACAGGCGC8700.1757550903320559No Hit
GGCTACCAGGAACCACCGGCACCACAAGCCC8490.17151272608266147No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA5180.1046449848183965No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)