FastQCFastQC Report
Wed 31 May 2023
EGAF00007927802

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927802
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences474460
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG46160.9728955022551954No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT13520.28495552839016985No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC8760.18463094886818698No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8620.18168022594106983No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATC8400.17704337562702863No Hit
GGTTACCAGGAACCGCCGGCACCACAGGCGC8270.174303418623277No Hit
GGCTACCAGGAACCACCGGCACCACAAGCCC7900.16650507945875312No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)