FastQCFastQC Report
Sun 21 May 2023
EGAF00007927808

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927808
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences454712
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG45070.991176832808459No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT15710.34549341121413113No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC10750.23641337813825014No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT10660.23443410334453457No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7920.17417618184697126No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG7760.170657471102588No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT7570.1664790020936329No Hit
GCTTGGGCGCTGAAAAACCCGCACCTGGCAT6060.1332711694435159No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5910.1299723781206566No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG5870.12909270043456078No Hit
CAGACCCCGGAACAGAGCACCCCGTCCCGCA5440.11963616530903078No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA5360.11787680993683915No Hit
CAGGACAGCCTGCCGGATACCAAAGCATCTG5280.1161174545646475No Hit
GAACGTCCATCCGCCGGTGAAGCGCAGGCTC5270.11589753514312356No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5260.11567761572159961No Hit
CAGGGTGCTCTGACTCTGTCTCTGCCGAAAC5170.11369834092788403No Hit
ACCGCGTCCGGTGAAGAAGTAGCAGTTCTGA5050.11105930786959657No Hit
CAGGGCGCGCTGACCCTGTCCCTGCCGAAAC4970.10929995249740496No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG4950.10886011365435705No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG4920.10820035538978519No Hit
ACCGCATCCGGTGAAGAAGTTGCGGTACTGA4660.10248245043016238No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG4660.10248245043016238No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC4630.10182269216559053No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATG4620.10160277274406657No Hit

[OK]Adapter Content

Adapter graph