FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007927816

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927816
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences446825
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG45631.0212051698092095No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT21970.49169137805628604No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC13920.31153136015218486No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT13680.3061601298047334No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG11210.25088121747887876No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG10730.24013875678397584No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA8350.1868740558384155No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC6930.155094276282661No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG4850.10854361327141497No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC4490.1004867677502378No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)