FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007927830

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927830
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences445187
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG45751.0276580403291202No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT24820.5575185259228145No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG19170.4306055657510215No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT15970.3587256591050502No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA10200.22911720243403333No Hit
CAGTCCCAACCGCAGCGTCGTAAACGTCGCG6750.15162167808134558No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC6310.14173819091752454No Hit
GACCCAGCTATCGTTCAGCCGAAAGCAGCAA5260.11815259654931523No Hit
CAGGGCCGTTATACTACCAACGACGGTTACG4640.1042258646366583No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)