FastQCFastQC Report
Sun 21 May 2023
EGAF00007927846

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927846
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences431413
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTCGCCACACCCAGAAAGCACCGAAACGTA15230.35302598669951996No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10420.24153189634990138No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA7050.16341649417147835No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6020.1395414602712482No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA5870.13606451358674868No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5500.12748804509831646No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC4800.11126229390398527No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)