FastQCFastQC Report
Wed 31 May 2023
EGAF00007927854

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927854
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences417123
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11270.2701840943798352No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT8520.20425629850188073No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8020.19226942652407084No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA4190.10044998717404698No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)