FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007927870

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927870
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences402068
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG41181.0242048608693055No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT17800.4427111831829442No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5650.14052349353840646No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5380.1338082115463056No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG4760.11838793437925924No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)