FastQCFastQC Report
Sun 21 May 2023
EGAF00007927872

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927872
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences454119
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC12560.2765794868745857No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT12240.26953287574402307No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11820.2602841986351595No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG9060.1995071776340563No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT8850.1948828390796245No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA8130.17902796403585844No Hit
GACGCTAACGGCAACAACCTGACTTTCGAAC7150.1574477174485102No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG7000.15414461848105893No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT6470.14247366879606446No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG6200.13652809065465218No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6180.13608767745899203No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG5810.1279400333392789No Hit
ACCGATTGCGACCTGGATCCGATGGAAGGCA5770.12705920694795858No Hit
CGTGAACGCCAGAAACGTGTTGACGATGAGG5660.12463693437182764No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA5290.11648929025211453No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC5160.11362660448032344No Hit
TCTGGCGCTGGCACCTCTTCTGCCTCTTCCG4980.10966288571938193No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG4870.10724061314325099No Hit
ACTAGCGAACCGTGCGAAGCGCTGGACCTGT4800.10569916695844042No Hit
CAGAACCTGACCCTGCGTATCCAGGTTTCTA4710.10371730757796965No Hit
CGTAAAGCTAAACCGGCAACTAAGCCGGCAG4680.10305668778447939No Hit

[OK]Adapter Content

Adapter graph