FastQCFastQC Report
Sun 21 May 2023
EGAF00007927874

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927874
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences410164
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT28500.6948440136140666No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA16310.39764581972089214No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9620.23454033020937967No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG8860.21601115651300454No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8220.20040764182132023No Hit
ACTAGCGAACCGTGCGAAGCGCTGGACCTGT7730.18846120088549945No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATG7420.18090324845671488No Hit
CAGAAACAGCTGCTGCAGGGTGATGTTGAAG6670.16261787967739733No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA6610.16115505017505194No Hit
CCGTGGCAGCCGCTGCCGGGTCCGCAGGTGA6090.14847719448805843No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5960.14530773056631005No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5680.13848119288869817No Hit
AGCGGTGACTGTGGCGGCATCCTGCGCTGCC5630.13726216830341034No Hit
GTGGCACAGTCCCAGTACTTCGACCTGCCGC5520.1345803142157771No Hit
CAGAAACAGCTGCTGCAGGGCGATGTGGAAG5140.12531572736758956No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA5020.12239006836289874No Hit
CACCCAGGTGTGCCGGTCTCTCCAGCCGTTA4280.10434850450063878No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)