FastQCFastQC Report
Wed 31 May 2023
EGAF00007927880

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927880
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences433370
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT17830.4114267254309251No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10460.24136419226065486No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8520.1965987493365946No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6710.15483305258785796No Hit
GCAGACGATGACAAAGGTACCAACATGTCTG6590.15206405611832846No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG6500.14998730876618133No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT6470.14929505964879894No Hit
ATGTGCGAAGACACCATCACCTACGAATGTC4760.10983685995800355No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)