FastQCFastQC Report
Sun 21 May 2023
EGAF00007927882

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927882
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences437061
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT18520.42373947801336653No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11520.2635787681811006No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8990.20569211162743875No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG6840.15649989360752847No Hit
GCAGACGATGACAAAGGTACCAACATGTCTG6680.15283907738279096No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT6650.15215267434065266No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6530.14940706217209956No Hit
ATGTGCGAAGACACCATCACCTACGAATGTC4620.10570606848929553No Hit
GACGATAAAGGCACCAACATGTCCGCTTTCC4400.10067244618028148No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)