FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007927892

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927892
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences413159
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT23720.5741131138375298No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC12410.30036862321769586No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG11060.26769355139304724No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC10680.2584961237683313No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10570.25583371050854514No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG10400.2517190718343301No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10240.24784647072918659No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6760.1636173966923146No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC6330.1532097812222413No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5960.14425439116659688No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA5740.13892956464702452No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT5720.13844548950888155No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG5030.12174489724295005No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG4360.10552838011516148No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG4340.10504430497701853No Hit
GAGAAAACGAAACAGACTCTGGCTTCTGTTT4140.1002035535955891No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)