FastQCFastQC Report
Sun 21 May 2023
EGAF00007927896

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927896
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences393807
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG39551.0042990601995394No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA9220.23412483780125798No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT7770.19730477111884756No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA4030.10233439222766481No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)