FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007927903

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007927903
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences393074
Sequences flagged as poor quality0
Sequence length44
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AACAGCGGTAGACGGAGCGGAAGAGGCCAGAGCGCCAGTACCCG12330.3136813933254298No Hit
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT8320.21166497911334758No Hit
AGAACTGAGCCTTCACTGGTTCAGCTCCCTCGGTCGAGTACGCT5870.1493357484850181No Hit
CGGCGGAACCGGGACAGTAGCCTGCGCGGTGGTCACCGGTGGGG5410.1376331174282705No Hit
GGCGCCCGCGGTTCAACCAATGGTAACACAAGAACTGAGCCTTC4710.11982476582017634No Hit
GTCGCTTGGACGAGTCGGCAGGGTTGCGCCGGTTTCGTTGGCGG4570.11626309549855753No Hit
AGCGGAAGAGCCGAACAGGCGACGGCTTGCACCTGGTTTGCGGG4420.11244702015396592No Hit
GGTAGAAGCGGCGCGGGAGCTACCAGACAGGCGACCCGGTGCGG4410.11219261513099314No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)