FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007929740

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007929740
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences518999
Sequences flagged as poor quality0
Sequence length44
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAAGTGTCGGCACGTACGATGTAATCGCGTTTCCCCAGTAGAA23120.44547291998635835No Hit
ATCGGTGCAGGATTGCGTAATTTAGTAGCGCCGTCCGTAAGAAA21120.40693720026435504No Hit
CGGCGGAACCGGGACAGTAGCCTGCGCGGTGGTCACCGGTGGGG15810.3046248644024362No Hit
GGATGCGGACGCAGTGGTAGCACGAGACTGACGCGGGGCGGTAG12940.24932610660136148No Hit
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT9140.17610823912955517No Hit
CGGGCTTTTACGACGTGCGCGCGGTGCGGTTGGAGCCGGCTCCG8840.17032788117125466No Hit
GGTTGCCAGCGGACCAATGATAGTCGGCGGGGTTTTCGGACGGC6480.12485573189929075No Hit
TGCCGCCAGTTCAGATGCGCTCAGATCGGATTTCGGGATATAGT6380.12292894591319059No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)