FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007929741

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007929741
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences518999
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT50750.9778438879458342No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG43910.8460517264965828No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT15710.30269807841633606No Hit
TCTAACAGCGTAAACGGTTCTTCCCAGGCCG12610.2429677128472309No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9140.17610823912955517No Hit
CGCGCTGCGGAAGTACAGGCGGACTACGCTT8390.1616573442338039No Hit
CTGCCGCAGTCTCCAGGCCCAGCGTTCCCGC6800.13102144705481128No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6530.12581912489234082No Hit
GATGGCGAACACCTGGAAGGTGGCGACGGCA6200.11946073113821029No Hit
TTCAAATACACTGTCGGTGAAGCCCCAGAAG6150.11849733814516021No Hit
CACACCCCTCCGATGCCGTCTATCGGTCTGG5250.1011562642702587No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)