FastQCFastQC Report
Sun 21 May 2023
EGAF00007929795

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007929795
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences406943
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT51171.257424258434228No Hit
AGCGGTGACTGTGGCGGCATCCTGCGCTGCC34490.8475388445064788No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT21150.5197288072285308No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG18460.4536261835195592No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC10990.2700623920303335No Hit
GCTCCGACCAGCGCGGCGTCTCGCAAACCTG9560.23492233556050846No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG8700.21378915474648785No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG8640.21231474678271894No Hit
TCCACCGGTGGTAACGGCCTGGTTGGTTTCG8380.20592564560638713No Hit
CCGGATCCGGCTGTTGCCCCGACCAGCGCGG8010.1968334631631457No Hit
CCGGACCCAGCGGTGGCACCGACTTCTGCGG7780.19118156596869834No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7700.18921568868367317No Hit
ACCCAGAACCCAGTGGAAAACTACATCGACT7030.17275146642158729No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA6630.16292207999646144No Hit
CCGGCCGTGGCACCAACCAGCGCTGCCTCCC5960.14645785773437558No Hit
GGCGAAGGTGTAGTTGGCTTCGCGGATGTTC5360.13171377809668677No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC5350.1314680434360586No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC5330.13097657411480232No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTA5150.12655335022349568No Hit
GGCCTGACTTCTTATGATGAACCGCTGGTTA5000.12286733031407347No Hit
GCACCGACCTCCGCGGCGAGCCGTAAACCAG4770.11721543311962608No Hit

[OK]Adapter Content

Adapter graph