FastQCFastQC Report
Sun 21 May 2023
EGAF00007929812

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007929812
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences384851
Sequences flagged as poor quality0
Sequence length44
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCCTGGTCGGAACGGACCACCTGACGGAAAGAGCGGCGACCGA8710.22632135553759766No Hit
CAAAGTGTCGGCACGTACGATGTAATCGCGTTTCCCCAGTAGAA5700.14810926826226253No Hit
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT5370.13953452115234208No Hit
ATCGGTGCAGGATTGCGTAATTTAGTAGCGCCGTCCGTAAGAAA4710.12238502693250115No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)