FastQCFastQC Report
Sun 21 May 2023
EGAF00007929835

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007929835
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences582494
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT17240.29596871384082923No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10680.1833495280638084No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9860.16927212984168077No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7330.12583820605877485No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG6650.11416426606969342No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)