FastQCFastQC Report
Sun 21 May 2023
EGAF00007929841

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007929841
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences621043
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC34870.5614748093127206No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA28890.4651851804142387No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA23780.38290424334546885No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG23030.3708277848715789No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT21510.3463528290311621No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT16500.2656820864255776No Hit
GGTTACCAGGAACCGCCGGCACCACAGGCGC16140.2598853863581105No Hit
GGCTACCAGGAACCACCGGCACCACAAGCCC15920.25634295853910277No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT15580.2508682973642727No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC11970.19274027724328266No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA11890.19145212167273443No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11150.17953668264516304No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT9120.1468497350425011No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA9090.14636667670354547No Hit
CCGTGGCCGGGCCCAGCAGATAACCGCATTC9080.14620565725722695No Hit
GAACGTACCACTGACGGTAAACTGGATCCGC8970.1444344433477231No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA8830.14218017109926367No Hit
GCTCTGGTCTCCGCCATGGAACGCACCGAAC7250.11673909858093562No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC7230.11641705968829855No Hit
GGCCGTCGTCCGTTCTTCCACCCGGTTGGTG7220.11625604024198001No Hit
TCCCCGCCTCGTCGCCCGCCGCCGGGTCGTC6500.10466264010704573No Hit

[OK]Adapter Content

Adapter graph