FastQCFastQC Report
Wed 31 May 2023
EGAF00007929901

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007929901
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences557722
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG47100.8445067614331154No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10350.1855763265569585No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7560.1355514037459523No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTA7470.13393769655850046No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA7100.12730356701008747No Hit
CGTAAAGCTAAACCGGCAACTAAGCCGGCAG6880.12335894944076081No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5680.10184285360806997No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5620.10076704881643542No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)