FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007929911

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007929911
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences407997
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT14120.34608097608560845No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG14060.3446103770370861No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC12030.2948551092287443No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG10440.2558842344429003No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG9940.2436292423718802No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7280.1784326845540531No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC6260.15343250072917203No Hit
AACGACCTGTACCGCCGCGTGATCAATCGTA4690.11495182562616883No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC4670.11446162594332802No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTA4560.11176552768770358No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA4160.10196153403088748No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA4130.10122623450662628No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)