FastQCFastQC Report
Wed 31 May 2023
EGAF00007929953

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007929953
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences450905
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT40780.9044033665628014No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG23700.5256096073452279No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT13530.3000632062186048No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC7030.1559086725585212No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA6700.14859005777270157No Hit
AGCGGTGACTGTGGCGGCATCCTGCGCTGCC4730.10490014526341469No Hit
CAGGAAACCGTTACCACCCAAGAGCCAGTTA4730.10490014526341469No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)