FastQCFastQC Report
Sun 21 May 2023
EGAF00007929971

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007929971
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences370552
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40631.0964722899889894No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA23200.6260929640104493No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA11760.31736436451564154No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA9910.26743884798894624No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9260.2498974502903776No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG8060.2175133314622509No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC7910.21346531660873508No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT7810.2107666400397245No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG5820.15706297631641444No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT4900.1322351518815173No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA4410.11901163669336558No Hit
ACCAGCGGTAATGTTAGCGTTGGTTATAACC4250.11469375418294869No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCG3930.1060579891621149No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)