FastQCFastQC Report
Wed 31 May 2023
EGAF00007929983

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007929983
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences551683
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50300.911755482768184No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT27740.5028249918884578No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA18050.32718064540687314No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC14110.25576282031528974No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11000.1993898670069587No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA9510.17238160320328885No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA8000.14501081236869723No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA7360.13340994737920145No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA7280.1319598392555145No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT7220.13087225816274928No Hit
ATGGACGAACTGCAGCCGACCATGCAACTGA6130.11111453497751426No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)