FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007930031

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930031
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences481158
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG45660.9489606324741561No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9430.19598551827050573No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6270.1303106256157021No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAG6190.12864797010545392No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5720.1188798689827458No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5330.11077442337028584No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG5210.10828044010491357No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5140.10682561653344638No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)