FastQCFastQC Report
Sun 21 May 2023
EGAF00007930041

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930041
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences515328
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG46130.8951580352707402No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT25110.4872624813710879No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG16120.3128104818678589No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG13700.26585009935419773No Hit
TCTGGCGCTGGCACCTCTTCTGCCTCTTCCG11400.2212183308494784No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)