FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007930057

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930057
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences501705
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT34340.6844659710387578No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT26690.5319859279855692No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA16440.3276826023260681No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10130.20191148184690205No Hit
CAGGGCCGTTATACTACCAACGACGGTTACG9620.19174614564335615No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG9110.18158080943981025No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG8970.17879032499177805No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC8660.17261139514256385No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC8210.16364198084531748No Hit
GCGCAGGGTCGCTACACTACCGACGACGGCT7870.15686509004295351No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG7660.1526793633709052No Hit
GAGAAACCGTACGATCCGTTCGACCGCAGCC7480.14909159765200666No Hit
ATGGACGAACTGCAGCCGACCATGCAACTGA7440.1482943163811403No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG7270.14490587097995836No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA6900.13753101922444466No Hit
GACCCAGCTATCGTTCAGCCGAAAGCAGCAA6550.13055480810436412No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG6530.13015616746893097No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6230.12417655793743336No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT5750.1146091826870372No Hit
GAAAAGCCATACGATCCGTTCGACCGTTCCC5060.10085608076459275No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC5040.10045744012915957No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)