FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007930075

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930075
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences510624
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT54551.0683007457542144No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG47670.9335636397819138No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA38100.7461458920849784No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC17730.3472222222222222No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG16200.31725888324873097No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA15980.31295042927868644No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG14780.28944977126026195No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA14320.28044118568653253No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC13650.26731998495957887No Hit
CGTGAACGCCAGAAACGTGTTGACGATGAGG12480.24440684339161498No Hit
GCACTGGGCCAGCGTCGTGCCGATGCAGTTA12270.24029422823839067No Hit
GCGCTGGGCCAGCGTCGCGCTGACGCAGTTA10800.21150592216582065No Hit
ATGTGCGAAGACACCATCACCTACGAATGTC9860.19309707338472143No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC9710.19015949113241837No Hit
GCGGACGAAGAGGAAGAGGAACTGCTGGCGC8520.16685467193081405No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG8350.1635254120448706No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC8240.16137118505984835No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA7820.15314595475339976No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT7580.14844582314971486No Hit
TCCGAACCAGAAATCACTGAACACCGTGACC7470.14629159616469262No Hit
CAGACCCCGGAACAGAGCACCCCGTCCCGCA7290.14276649746192893No Hit
GCTTGGGCGCTGAAAAACCCGCACCTGGCAT7160.14022059284326627No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA6290.12318261577990851No Hit
GCAGCTCACTCCCGTTCCGGCTCCGTGAGCC5860.1147615466566397No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC5670.11104060913705585No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)