FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007930083

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930083
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences452795
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG43780.9668834682361775No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11680.25795337846045124No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC11250.2484568071643901No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG10090.22283814971455074No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG9570.21135392396117447No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTA6820.1506200377654347No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC6170.1362647555737144No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)