FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007930084

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930084
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences472468
Sequences flagged as poor quality0
Sequence length44
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT12770.2702828551351626No Hit
GTCGCTTGGACGAGTCGGCAGGGTTGCGCCGGTTTCGTTGGCGG9700.20530490953884709No Hit
CGGACGCGTTGGCAGGGTCGCGCCAGTTTCGTTTGCAGTCAGAG8760.1854093822227114No Hit
ACGAACAATCACCTTAATTGCTTTGCCGTTAACTTTAACTACGT7120.1506980366924321No Hit
GTCAGACGGACGAGTTGGCAGGGTTGCGCCGGTTTCGTTTGCGG5870.12424121845288993No Hit
CGGACGAGTCGGCAGGGTAGCACCGGTTTCGTTCGCGGTCAGTG5680.12021978208047954No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)