FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007930085

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930085
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences472468
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT12780.2704945096810789No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC10990.23260834596205457No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG10650.2254120914008991No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG10450.22117900048257236No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9900.20953800045717383No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTA7000.14815818214143603No Hit
GACGCCCTGACGGAGGGTCTGAGCGATGAAC6980.14773487304960337No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)