FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007930089

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930089
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences419592
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG44281.0553108734198937No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT8100.19304467196705372No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG7600.18112833419130964No Hit
TCTGGCGCTGGCACCTCTTCTGCCTCTTCCG7440.17731510610307155No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5770.1375145379320864No Hit
CCGGATCCGGCTGTTGCCCCGACCAGCGCGG4770.1136818623805983No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG4580.10915365402581556No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG4200.10009723731625006No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)