FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007930092

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930092
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences409962
Sequences flagged as poor quality0
Sequence length44
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCGCGGGCACGCTGCAGGATCGCGTGCTGTTGGTCCATCGCAC14880.36296046950692995No Hit
CGGACCTTCGCCCGGGTCATCTGCCGGGCCCTGTTCGATGGCAC10890.265634375868983No Hit
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT10730.2617315751215966No Hit
ACCCTGACCACGCGGACCGGTGGAAGGACCTTCGCCCGGATCAT10330.2519745732531308No Hit
GGTGGATGGGCCTTCACCAGGATCGTCAGCCGGGCCCTGCTCGA7020.1712353827915758No Hit
CATATCCGGTTCACCGTCCGGGCCACCTTCCTGGTGATATTCGA6670.16269800615666818No Hit
CGGTTCGCCGTCCGGGCCACCTTCCTGGTGATATTCAAAGTAAT5240.12781672447690273No Hit
CAAAGTGTCGGCACGTACGATGTAATCGCGTTTCCCCAGTAGAA4370.1065952454129895No Hit
GCTAGAGGCCTGAGACAGGCCGCGGATCTGCTTACGCATTTTTT4350.1061073953195662No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)