FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007930093

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930093
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences409962
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAACTGTCCTCTGGCTACCGCATCAACCGTG15580.3800352227767452No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC14380.3507642171713476No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG10780.2629512003551549No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10690.26075587493475005No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG8910.217337216620077No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT8910.217337216620077No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT7800.19026153643508423No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA7490.18269985998702318No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC5520.13464662578482883No Hit
ATGATCATCAACCACAACACCAGCGCAATCA5300.1292802747571726No Hit
ATGGTGGTTCAGCACAACCTGACTGCGATGA5260.128304574570326No Hit
ATGGTGGTCCAGCACAATCTGCAGGCCATGA4510.11001019606695255No Hit
ATGGTTGTCCAGCACAACATGCAGGCTGCGA4310.10513169513271961No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)