FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007930096

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930096
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences474945
Sequences flagged as poor quality0
Sequence length44
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCTGCGGAGGTAACGTTGTTGTTGGTTTTCGGAGCGGTGGTGT27890.5872258893134995No Hit
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT20610.43394498310330665No Hit
ATCGCCCGGAACTACCTGGCTAGTGTGACCGGTCTCGGCAGCGG20610.43394498310330665No Hit
CATGGTGTCGCCCGGCACTACCTGGGAAGTGTGGCCGGTCTCAG16850.3547779216540863No Hit
ACGAACAATCACCTTAATTGCTTTGCCGTTAACTTTAACTACGT16160.34024992367537293No Hit
GTCACCCGGAACGACCTGGCTGGTGTGGCCAGTTTCTGCTGCGG14540.30614071102969814No Hit
CATGGTGTCACCCGGGACAACCTGGCTGGTGTGACCAGTCTCAG14220.2994030887787007No Hit
GGCTGGAATGGATTCGGAGTTGCGCGGGCCGGTCGGCAGGGTGT12550.2642411226563076No Hit
GGTAGTGTTGTCGCCGGTGATACCGGACGTAGAGCTGCTGCCGA9310.19602269736495806No Hit
TGCTGGTTTCGCGGCCGGTTTTGCGGTCGGTTTCGCAGCCGGTT9070.19096948067670994No Hit
CAAAGTGTCGGCACGTACGATGTAATCGCGTTTCCCCAGTAGAA8420.1772836854793713No Hit
TGCCGCCAGTTCAGATGCGCTCAGATCGGATTTCGGGATATAGT8210.1728621208771542No Hit
GTCGCTTGGACGAGTCGGCAGGGTTGCGCCGGTTTCGTTGGCGG7710.16233458610997062No Hit
ATCGGTGCAGGATTGCGTAATTTAGTAGCGCCGTCCGTAAGAAA7190.15138594995209972No Hit
CTGGACGGAAACAGAACGACGGCTACGTTTGGAGTGGCGGGTAC6960.14654328395919528No Hit
GTTGCGTGGGCCGGTCGGCAGGGTATCTGCTACACGAGCTACCG6360.13391024223857498No Hit
GTCGCCCGGTACTACCTGGGAGGTGTGGCCAGTTTCAGCAGCGG6090.12822537346429586No Hit
CATGGTATCACCTGGAACAACCTGGCTAGTGTGGCCGGTTTCAG5830.12275105538536041No Hit
CGGACGCGTTGGCAGGGTCGCGCCAGTTTCGTTTGCAGTCAGAG5130.10801250671130343No Hit
GCTTTTGGCTACCGGCTGGGTGTTATTCGTGGTAGCGGATTGGT4970.10464369558580468No Hit

[OK]Adapter Content

Adapter graph