FastQCFastQC Report
Wed 31 May 2023
EGAF00007930119

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930119
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences457920
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40230.8785377358490566No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT16990.3710255066387142No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA8050.17579489867225714No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC5430.11857966457023061No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT4740.10351153039832284No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)