FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007930121

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930121
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences489482
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT18640.38081073461332593No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG13470.2751888731352736No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA9650.19714718825207056No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC5700.11644963451158573No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5180.10582615908245861No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC4970.10153590938992649No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)