FastQCFastQC Report
Wed 31 May 2023
EGAF00007930133

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930133
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences462909
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22610.48843293174252395No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC11310.24432447846120942No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGATG8860.19139830938694216No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT8270.178652823773139No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT6050.13069523383645598No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGTTC5340.11535744606391322No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCAGC4960.1071484892279044No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG4630.10001965829137044No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)