FastQCFastQC Report
Sun 21 May 2023
EGAF00007930134

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930134
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences468141
Sequences flagged as poor quality0
Sequence length41
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGT11230.23988499191482907No Hit
CGGCGCACCGTGGTTGATCGGCTGGGTCAGCGGCAGGTCGA8650.18477339092282025No Hit
CGGACCTTCGCCCGGGTCATCTGCCGGGCCCTGTTCGATGG5690.12154457738160084No Hit
TGCCGCCAGTTCAGATGCGCTCAGATCGGATTTCGGGATAT5570.11898124710290275No Hit
ACCCTGACCACGCGGACCGGTGGAAGGACCTTCGCCCGGAT4920.10509654142662148No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)