FastQCFastQC Report
Sun 21 May 2023
EGAF00007930135

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930135
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences468141
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22330.47699304269440185No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC11040.2358263856402238No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGATG8670.18520061263593662No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT7580.16191702927109566No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT5650.12069013395536814No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGTTC5350.11428180825862294No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG5060.1080870934184359No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCAGC4700.10039710258234165No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)