FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007930138

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930138
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences486825
Sequences flagged as poor quality0
Sequence length41
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGT10690.2195860935654496No Hit
AGAACTGAGCCTTCACTGGTTCAGCTCCCTCGGTCGAGTAC7540.15488111744466698No Hit
ACCTGCGGAGGTAACGTTGTTGTTGGTTTTCGGAGCGGTGG7090.1456375494274123No Hit
GTGCGGGTAGATCGGCAGGTTGCCCAGCAGAGTGCCGTCGA7050.14481589893698968No Hit
GGCGCCCGCGGTTCAACCAATGGTAACACAAGAACTGAGCC6920.14214553484311612No Hit
CGGCGGAACCGGGACAGTAGCCTGCGCGGTGGTCACCGGTG6750.13865352025881988No Hit
GTCGCTTGGACGAGTCGGCAGGGTTGCGCCGGTTTCGTTGG6010.12345298618600113No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)