FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007930141

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930141
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences484452
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG32080.662191507104935No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC10680.22045527730301454No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCCGT6210.12818607416214609No Hit
GATGAACGTAAACGCCACACCAAAATCCACCTG6020.12426411698166176No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT5630.11621378382172022No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5530.11414959583199161No Hit
ATGGACGAACTGCAGCCGACCATGCAACTGATG4850.10011311750183713No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)