FastQCFastQC Report
Wed 31 May 2023
EGAF00007930171

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930171
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences457106
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21560.4716630278316189No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC10990.24042563431676678No Hit
CCGGATCCGGCTGTTGCCCCGACCAGCGCGGCC7550.16516956679632294No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG7160.15663762890883076No Hit
CCGGACCCAGCGGTGGCACCGACTTCTGCGGCT6340.1386986825812831No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT5330.11660315112905978No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)