FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007930177

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930177
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences447031
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22420.501531213718959No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG8210.18365616702197388No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC7330.16397073133630555No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACGTT6380.1427194087210954No Hit
ATCGAACAGAAACAGCTGCTGCAGGGCGATGTA4500.1006641597562585No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)