FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007930179

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930179
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences493672
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT21710.4397656743748886No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC15430.3125557050025118No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG14780.29938906804517984No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCAGC13740.2783224489134486No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCGGT11990.24287381095140093No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATCCG10480.21228670048129122No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT10280.20823542757134295No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCGAA9920.20094313633343594No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGTTC9790.19830980894196956No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCGGT9130.18494060833914014No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATCCA8990.18210471730217634No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTCGC8660.17542011700076166No Hit
GGTTACCAGGAACCGCCGGCACCACAGGCGCCG8350.16914064399034176No Hit
GGCTACCAGGAACCACCGGCACCACAAGCCCCG6410.1298432967638432No Hit
GGCCGTCGTCCGTTCTTCCACCCGGTTGGTGAA5690.1152587142880293No Hit
CAGGGCCGTTATACTACCAACGACGGTTACGTT5640.11424589606054222No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5550.11242282325106549No Hit
TCCCCGCCTCGTCGCCCGCCGCCGGGTCGTCGT5430.1099920595050965No Hit
CCGGTAGGCGAGGCGGACTATTTCGAATACCAC5420.10978949585959909No Hit
CGCCGTCCGCCACCTGGTCGTCGCCCGTTCTTC5400.10938436856860426No Hit

[OK]Adapter Content

Adapter graph