FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007930181

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930181
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences476807
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG23310.4888770508822228No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT20510.4301530808062801No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC14510.30431600207211723No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG12970.27201781853034873No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCAGC12010.2518838859328827No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCGGT10880.22818456943794868No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATCCG10200.21392303384807687No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT9540.20008095518731897No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCGAA9370.19651557128985103No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGTTC9260.1942085581797247No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTCGC8430.17680109562149884No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATCCA8300.17407462558225864No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCGGT8040.16862168550377823No Hit
GGTTACCAGGAACCGCCGGCACCACAGGCGCCG7970.16715358625187968No Hit
GGCTACCAGGAACCACCGGCACCACAAGCCCCG5840.12248142330125186No Hit
TCCCCGCCTCGTCGCCCGCCGCCGGGTCGTCGT5510.1155603839708729No Hit
CAGGGCCGTTATACTACCAACGACGGTTACGTT5450.11430201318353128No Hit
GGCCGTCGTCCGTTCTTCCACCCGGTTGGTGAA5240.10989771542783558No Hit
CGCCGTCCGCCACCTGGTCGTCGCCCGTTCTTC5000.10486423227846907No Hit
GCGCAGGGTCGCTACACTACCGACGACGGCTAC4850.10171830531011498No Hit

[OK]Adapter Content

Adapter graph