FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007930185

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007930185
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences462369
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22920.4957079735016837No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT7540.16307321641373015No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG6640.14360824363225044No Hit
GTTGCGACCCCACACGCCTCCGCGCGCGCTCAG6120.13236181491406215No Hit
CCGGATCCGGCTGTTGCCCCGACCAGCGCGGCC4940.10684107282278872No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC4650.10056902603764527No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)